PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG046550.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 200aa    MW: 22439.3 Da    PI: 5.9452
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG046550.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP51.51.7e-166383871
           E2F_TDP 38 dvknkrRRiYDilNVLealnliekkekneirwkg 71
                      d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4BG046550.8  6 DEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 38
                      789*********************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MQQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSINDIEEL QADLAGVKGR  60
IEKKSAYLQE LQDQLYGSGN IPSGGVALPF ILIQTRPHAT VEVEISEDMQ LVHFDFNTTP  120
FELHDDSYVL KALNSYGKEE NAGTSEPISN GCEGSSTPNF YRHQIQQSAM ASNGTNRLPS  180
SPPPPVPGIL KGRVKHEHLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.12e-75E2F/DP family protein