PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG046550.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 297aa    MW: 33434.6 Da    PI: 8.6052
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG046550.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.22.4e-2736122371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4BG046550.5  36 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 122
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
QQPRHQRRRR AFLAGSHQSI KKKKRRAAAV GPDKGGRGLR QFSMKVCEKV ESKGRTTYNE  60
VADELVAEFT DPNNNIEPPD PDNPNAQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW  120
KGLPRTSIND IEELQADLAG VKGRIEKKSA YLQELQDQYL GMQNLINRNE QLYGSGNIPS  180
GGVALPFILI QTRPHATVEV EISEDMQLVH FDFNTTPFEL HDDSYVLKAL NSYGKEENAG  240
TSEPISNGCE GSSTPNFYRH QIQQSAMASN GTNRLPSSPP PPVPGILKGR VKHEHLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1726RRRRAFLAGSHQSIKKKKRR
2827RRRRAFLAGSHQSIKKKKRR
32126KKKKRR
42227KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-116E2F/DP family protein