PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4BG046550.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 165aa MW: 18602 Da PI: 8.1741 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 88.1 | 6.4e-28 | 39 | 125 | 3 | 71 |
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC4BG046550.4 39 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 125 689*******...*****999************************************************************.*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 165 aa Download sequence |
FLRLNNLDIN GDDAPSSQAP ISIKKKKRRA AAVGPDKGGR GLRQFSMKVC EKVESKGRTT 60 YNEVADELVA EFTDPNNNIE PPDPDNPNAQ QYDEKNIRRR VYDALNVLMA MDIISKDKKE 120 IQWKGLPRTS INDIEELQAD LAGVKGRIEK KSAYLQELQD QVCKT |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 24 | 29 | KKKKRR |
2 | 25 | 30 | KKKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03415.1 | 3e-68 | E2F/DP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4BG046550.4 |