PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG046550.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 110aa    MW: 12071.7 Da    PI: 7.9231
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG046550.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP28.23.1e-093976338
           E2F_TDP  3 eksLrlltqkflklleksee.givtlnevakeLvse....d 38
                      +++Lr++++k   ++ek+e+ g++t+neva+eLv+e    +
  TRIDC4BG046550.3 39 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpN 76
                      689*******...*****999*************9977651 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
FLRLNNLDIN GDDAPSSQAP ISIKKKKRRA AAVGPDKGGR GLRQFSMKVC EKVESKGRTT  60
YNEVADELVA EFTDPNNNIE PPDPDNPNAV KKYECPLHQL VVLSGMCSLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12429KKKKRR
22530KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-28E2F/DP family protein