PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG046550.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 303aa    MW: 33704.8 Da    PI: 5.993
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG046550.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.22.5e-2742128371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4BG046550.2  42 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 128
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
GTAFLRLNNL DINGDDAPSS QAPISIKKKK RRAAAVGPDK GGRGLRQFSM KVCEKVESKG  60
RTTYNEVADE LVAEFTDPNN NIEPPDPDNP NAQQYDEKNI RRRVYDALNV LMAMDIISKD  120
KKEIQWKGLP RTSINDIEEL QADLAGVKGR IEKKSAYLQE LQDQYLGMQN LINRNEQLYG  180
SGNIPSGGVA LPFILIQTRP HATVEVEISE DMQLVHFDFN TTPFELHDDS YVLKALNSYG  240
KEENAGTSEP ISNGCEGSST PNFYRHQIQQ SAMASNGTNR LPSSPPPPVP GILKGRVKHE  300
HLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732KKKKRR
22833KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-119E2F/DP family protein