PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG043370.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 260aa MW: 28891.4 Da PI: 7.641

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG043370.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.2	4.1e-15	161	245	10	93
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 v +++ l +p +f ++hg+ ++++++l++ +g+sW v+l+++ +s++ l+ GW +F+ +ngL +gD++ F+ g+ s +e + TRIDC4BG043370.4 161 VRQKQYLNVPVEFQNAHGYAERSKVELRM---RGKSWFVNLKHSPRSRGrprASLRYGWHQFCVDNGLGVGDTCFFRALGEgSAGEVH 245 56678899********99888766664...67***994444444669**********************88887888544 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
VESFQFFQII LENSSTRLRL PDKFTTVLLE LDGGKPQEVK LRNAGHGRRF WDVKVVLDAD 60 GHMYLGFARA HDLRLGYFLV FSFDGDAVLT VKVFDVSMCR RHYQHDDDGS SGSSSDGDSG 120 SEDGSSNGDG GGNSSSMAVM GIDDGPASLF TVMLRECNLG VRQKQYLNVP VEFQNAHGYA 180 ERSKVELRMR GKSWFVNLKH SPRSRGRPRA SLRYGWHQFC VDNGLGVGDT CFFRALGEGS 240 AGEVHLLKVE VRKRDGSFLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	8e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG043370.4