PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042970.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 198aa    MW: 22116.4 Da    PI: 8.7243
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042970.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY129.25.5e-4011501162
             YABBY   1 advfssseqvCyvqCnfCntila..vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekees 91 
                       +d++s se++Cyv+C++Cnt+la  v vP + l+ +vtv+CGhC +l  ++ +    +++ + +            ++  ++ +   +  +++
  TRIDC4BG042970.4   1 MDLVSPSEHLCYVRCTYCNTVLAlqVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPPMVQPLSPN------------DH--HHPMGPFQGCTDC 79 
                       578999***************9744778*****************9866444444444444443............22..2233333444444 PP

             YABBY  92 astsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                        +++      s  +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa 
  TRIDC4BG042970.4  80 RRNQPLPPLASPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 150
                       4433333333566778899**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDLVSPSEHL CYVRCTYCNT VLALQVGVPC KRLMDTVTVK CGHCNNLSFL SPRPPPMVQP  60
LSPNDHHHPM GPFQGCTDCR RNQPLPPLAS PTSSDASPRA PFVVKPPEKK HRLPSAYNRF  120
MREEIQRIKA AKPDIPHREA FSMAAKNWAK CDPRCSSTVS ASNSAPEPRI VVPGPQQERA  180
TEQVVESFDI FKQMERST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.12e-50YABBY family protein