PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG042970.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 162aa MW: 18298 Da PI: 9.687 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 23.1 | 2.2e-07 | 15 | 37 | 1 | 23 |
YABBY 1 advfssseqvCyvqCnfCntila 23 +d++s se++Cyv+C++Cnt+la TRIDC4BG042970.3 15 MDLVSPSEHLCYVRCTYCNTVLA 37 578999***************98 PP | |||||||
2 | YABBY | 91.3 | 2.5e-28 | 54 | 113 | 103 | 162 |
YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa TRIDC4BG042970.3 54 PTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 113 4566788999*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
RKRPIVRWLA SMQSMDLVSP SEHLCYVRCT YCNTVLAGCT DCRRNQPLPP LASPTSSDAS 60 PRAPFVVKPP EKKHRLPSAY NRFMREEIQR IKAAKPDIPH REAFSMAAKN WAKCDPRCSS 120 TVSASNSAPE PRIVVPGPQL QERATEQVVE SFDIFKQMER ST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 2e-30 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG042970.3 |