PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042970.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 216aa    MW: 24334.1 Da    PI: 9.6953
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042970.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY1296.4e-40181671162
             YABBY   1 advfssseqvCyvqCnfCntila..vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekees 91 
                       +d++s se++Cyv+C++Cnt+la  v vP + l+ +vtv+CGhC +l  ++ +    +++ + +            ++  ++ +   +  +++
  TRIDC4BG042970.1  18 MDLVSPSEHLCYVRCTYCNTVLAlqVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPPMVQPLSPN------------DH--HHPMGPFQGCTDC 96 
                       578999***************9744778*****************9866444444444444443............22..2233333444444 PP

             YABBY  92 astsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                        +++      s  +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa 
  TRIDC4BG042970.1  97 RRNQPLPPLASPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 167
                       4433333333566778899**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
THRRKRPIVR WLASMQSMDL VSPSEHLCYV RCTYCNTVLA LQVGVPCKRL MDTVTVKCGH  60
CNNLSFLSPR PPPMVQPLSP NDHHHPMGPF QGCTDCRRNQ PLPPLASPTS SDASPRAPFV  120
VKPPEKKHRL PSAYNRFMRE EIQRIKAAKP DIPHREAFSM AAKNWAKCDP RCSSTVSASN  180
SAPEPRIVVP GPQLQERATE QVVESFDIFK QMERST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.16e-50YABBY family protein