PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042950.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 190aa    MW: 21778.6 Da    PI: 5.6672
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042950.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.98.2e-161322051
                      HHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyeyss 51
                      +lKKA+ELS LCdaeva+iifs +g+l+e+ss
  TRIDC4BG042950.2  1 LLKKAYELSLLCDAEVALIIFSGRGRLFEFSS 32
                      79****************************96 PP
2K-box912.2e-30551441099
             K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                         a++e  +q++ kLk ++e L+++qR++lGedL++Ls+keL+q+e+q++ slk+iR++Kn++ll+++ +l+ ke+elq++nk+Lrkkl+
  TRIDC4BG042950.2  55 PLAENEINYQQYLKLKTRLEYLESSQRNILGEDLGPLSMKELEQIENQIDISLKHIRTRKNKVLLDELYDLKSKEQELQDQNKNLRKKLQ 144
                       4456677899******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
LLKKAYELSL LCDAEVALII FSGRGRLFEF SSSSCMYKTL ERYRTCNCNS QEATPLAENE  60
INYQQYLKLK TRLEYLESSQ RNILGEDLGP LSMKELEQIE NQIDISLKHI RTRKNKVLLD  120
ELYDLKSKEQ ELQDQNKNLR KKLQDTSCAE NALHMAWQDA GQCSSSGHVI DTTYSGLVQH  180
PEHDSSVQVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.17e-53MIKC_MADS family protein