PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042920.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 266aa    MW: 30626.7 Da    PI: 8.379
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042920.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.23.4e-26148451
                      -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      enk+ rqvtf+kRrng+lKKA+ELS LCdaeva+iifs +g+l+e+ss
  TRIDC4BG042920.7  1 ENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSS 48
                      89********************************************96 PP
2K-box96.25e-321182001799
             K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                        +qe+ kLk ++e Lq++qR++lGedL++Ls+keL q+e+q++ slk+iRskKn++ll+q+ el+ ke+elq+en++Lrkkl+
  TRIDC4BG042920.7 118 NYQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLKHIRSKKNQVLLDQLFELKSKEQELQDENNDLRKKLQ 200
                       589******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
ENKISRQVTF AKRRNGLLKK AYELSLLCDA EVALIIFSGR GRLFEFSSSS CMYKTLERYR  60
TCNSNSQEAT PPLESELPLK KRNPSQLPPK KRNTSQLSIC WDNNFVWNYL VYLANKINYQ  120
EYLKLKTRVE FLQSSQRNIL GEDLGPLSMK ELDQIENQID ASLKHIRSKK NQVLLDQLFE  180
LKSKEQELQD ENNDLRKKLQ DTTSCCGENA VHMSWQDGGQ CSSRVLHPEH DTSMQIGYPR  240
AYMDQLNNRD HVACERPGGG SSAGWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.12e-59MIKC_MADS family protein