PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042540.24

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 450aa MW: 49874.5 Da PI: 5.1512

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042540.24	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	40.1	1.1e-12	36	115	41	128
NAM 41 kvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++P+d+p ++++ + ++fF+k+ + +++++ + + W+++g +++++ +g l g+k+++++y + ++++++tdW +h+y++ TRIDC4BG042540.24 36 CTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DISWQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 115 68****.667788999*9987755333..3...335********.999*******.5677779*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
DLLWHLAAEM GNGLAHRHPF ISEFIKYGDE GARFGCTHPR DMPGMRQDGH ALHFFHKKVN 60 LHNNENDKDI SWQKSGPSRS IILDGGLQGC KEIFALYAFK NSPQRTDWEL HQYHIKNTME 120 NEGELVLSKI FYKSQKCHCE CASKAPVQSA QDNSVTDDDS KEKEGAQLEK LSVNMATESN 180 FVEGNGNNRE QMLVEMYPDQ DKPCSLKHVL DTADVNHENQ INDQAETELD HMSLQERYRI 240 LLADMRSCSA RVSAEKCALN DMGNSSMQMD AETSGPVPKS ESEEINHGGT TYRECSVNGK 300 EIPVEDTEGP VNDKAFNSSA ELLLSQTPAC GDENVQLAPR NSGTYLVDVK TEPALDGCAI 360 YPSESPSVKF HHSNNNGLKV SGSLLECVPK DAEDSLPSLG VKSELSGYEL PGLCENSFIS 420 SMEPIVKKPH TRTLNCNGGL APCSRQRNKR

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

DLLWHLAAEM GNGLAHRHPF ISEFIKYGDE GARFGCTHPR DMPGMRQDGH ALHFFHKKVN  60
LHNNENDKDI SWQKSGPSRS IILDGGLQGC KEIFALYAFK NSPQRTDWEL HQYHIKNTME  120
NEGELVLSKI FYKSQKCHCE CASKAPVQSA QDNSVTDDDS KEKEGAQLEK LSVNMATESN  180
FVEGNGNNRE QMLVEMYPDQ DKPCSLKHVL DTADVNHENQ INDQAETELD HMSLQERYRI  240
LLADMRSCSA RVSAEKCALN DMGNSSMQMD AETSGPVPKS ESEEINHGGT TYRECSVNGK  300
EIPVEDTEGP VNDKAFNSSA ELLLSQTPAC GDENVQLAPR NSGTYLVDVK TEPALDGCAI  360
YPSESPSVKF HHSNNNGLKV SGSLLECVPK DAEDSLPSLG VKSELSGYEL PGLCENSFIS  420
SMEPIVKKPH TRTLNCNGGL APCSRQRNKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	445	450	RQRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	7e-28	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042540.24