PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042540.22

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 765aa MW: 86050.9 Da PI: 4.9463

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042540.22	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.6	1.1e-14	2	123	6	128
NAM 6 rFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 +F+P+d++l+ +L++++ + + +e+ik d ++P+d+p ++++ + ++fF+k+ + +++++ + + W+++g TRIDC4BG042540.22 2 QFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DISWQKSG 84 7*******.667777665553454432..2233322233338899**.667788999*9987755333..3...335* PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++ +g l g+k+++++y + ++++++tdW +h+y++ TRIDC4BG042540.22 85 PSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 123 ***.999*******.5677779*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 765 aa Download sequence
AQFNPSDSDL LWHLAAEMGN GLAHRHPFIS EFIKYGDEGA RFGCTHPRDM PGMRQDGHAL 60 HFFHKKVNLH NNENDKDISW QKSGPSRSII LDGGLQGCKE IFALYAFKNS PQRTDWELHQ 120 YHIKNTMENE GELVLSKIFY KSQKCHCECA SKAPVQSAQD NSVTDDDSKE KEGAQLEKLS 180 VNMATESNFV EGNGNNREQM LVEMYPDQDK PCSLKHVLDT ADVNHENQIN DQAETELDHM 240 SLQERYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE TSGPVPKSES EEMYGSFLAV 300 YDFICVTLIN VLFCNVGYRN HGGTTYRECS VNGKEIPVED TEGPVNDKAF NSSAELLLSQ 360 TPACGDENVQ LAPRNSGTYL VDVKTEPALD GCAIYPSESP SVKFHHSNNN GLKVSGSLLE 420 CVPKDAEDSL PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ 480 RNKRDSSEKV LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL LQILLDKGIV 540 VKEIKLYDVV EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC 600 LISLIEQFRD CPVEWGWCRD LQSFIFVFKS HNRLVLERPE YGYATYFFEI LQSVPIEWQI 660 RRMVTAMKLS SCGRTALIEN RPLLIGEDLS EGEAKVLQEY GWIPNTGLGT LLNYRDRVVH 720 DRWNEKYSTD WRMKIGKLLM NGYSEGELII THVPLNSEEI KLENP

Sequence ? help Back to Top

Protein Sequence Length: 765 aa Download sequence

AQFNPSDSDL LWHLAAEMGN GLAHRHPFIS EFIKYGDEGA RFGCTHPRDM PGMRQDGHAL  60
HFFHKKVNLH NNENDKDISW QKSGPSRSII LDGGLQGCKE IFALYAFKNS PQRTDWELHQ  120
YHIKNTMENE GELVLSKIFY KSQKCHCECA SKAPVQSAQD NSVTDDDSKE KEGAQLEKLS  180
VNMATESNFV EGNGNNREQM LVEMYPDQDK PCSLKHVLDT ADVNHENQIN DQAETELDHM  240
SLQERYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE TSGPVPKSES EEMYGSFLAV  300
YDFICVTLIN VLFCNVGYRN HGGTTYRECS VNGKEIPVED TEGPVNDKAF NSSAELLLSQ  360
TPACGDENVQ LAPRNSGTYL VDVKTEPALD GCAIYPSESP SVKFHHSNNN GLKVSGSLLE  420
CVPKDAEDSL PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ  480
RNKRDSSEKV LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL LQILLDKGIV  540
VKEIKLYDVV EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC  600
LISLIEQFRD CPVEWGWCRD LQSFIFVFKS HNRLVLERPE YGYATYFFEI LQSVPIEWQI  660
RRMVTAMKLS SCGRTALIEN RPLLIGEDLS EGEAKVLQEY GWIPNTGLGT LLNYRDRVVH  720
DRWNEKYSTD WRMKIGKLLM NGYSEGELII THVPLNSEEI KLENP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	479	484	RQRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	7e-30	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042540.22