PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042540.15

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 686aa MW: 76593 Da PI: 5.0667

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042540.15	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.8	1.4e-16	22	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+G +F+P+d++l+ +L++++ + + +e+ik d ++P+d+p ++++ + ++fF+k+ + +++++ + + TRIDC4BG042540.15 22 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DIS 104 699**********.667777666553454432..2233322233338899**.667788999*9987755333..3...335 PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 W+++g +++++ +g l g+k+++++y + ++++++tdW +h+y++ TRIDC4BG042540.15 105 WQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 148 ********.999*******.5677779*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
RCEATPAPEG IGGAAQQSWP GLPRGAQFNP SDSDLLWHLA AEMGNGLAHR HPFISEFIKY 60 GDEGARFGCT HPRDMPGMRQ DGHALHFFHK KVNLHNNEND KDISWQKSGP SRSIILDGGL 120 QGCKEIFALY AFKNSPQRTD WELHQYHIKN TMENEGELVL SKIFYKSQKC HCECASKAPV 180 QSAQDNSVTD DDSKEKEGAQ LEKLSVNMAT ESNGNNREQM LVEMYPDQDK PCSLKHVLDT 240 ADVNHENQIN DQAETELDHM SLQERYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE 300 TSGPVPKSES EEINHGGTTY RECSVNGKEI PVEDTEGPVN DKAFNSSAEL LLSQTPACGD 360 ENVQLAPRNS GTYLVDVKTE PALDGCAIYP SESPSVKFHH SNNNGLKVSG SLLECVPKDA 420 EDSLPSLGVK SELSGYELPG LCENSFISSM EPIVKKPHTR TLNCNGGLAP CSRQRNKRDS 480 SEKVLEEDGY KNDEGIPYPS RQKRKKKTAT DSIETALEED APGLLQILLD KGIVVKEIKL 540 YDVVEDDEML PDCTESDFQD LENVITKLFP QRTSLLKSVA KHGKGGKAIY CLACLISLIE 600 QSRYLQFRDC PVEWGWCRDL QSFIFVFKSH NRLVLERPEY GYATYFFEIL QSVPIEWQIR 660 RMVTAMKLSS CGRTALIENR PLLIGE

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

RCEATPAPEG IGGAAQQSWP GLPRGAQFNP SDSDLLWHLA AEMGNGLAHR HPFISEFIKY  60
GDEGARFGCT HPRDMPGMRQ DGHALHFFHK KVNLHNNEND KDISWQKSGP SRSIILDGGL  120
QGCKEIFALY AFKNSPQRTD WELHQYHIKN TMENEGELVL SKIFYKSQKC HCECASKAPV  180
QSAQDNSVTD DDSKEKEGAQ LEKLSVNMAT ESNGNNREQM LVEMYPDQDK PCSLKHVLDT  240
ADVNHENQIN DQAETELDHM SLQERYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE  300
TSGPVPKSES EEINHGGTTY RECSVNGKEI PVEDTEGPVN DKAFNSSAEL LLSQTPACGD  360
ENVQLAPRNS GTYLVDVKTE PALDGCAIYP SESPSVKFHH SNNNGLKVSG SLLECVPKDA  420
EDSLPSLGVK SELSGYELPG LCENSFISSM EPIVKKPHTR TLNCNGGLAP CSRQRNKRDS  480
SEKVLEEDGY KNDEGIPYPS RQKRKKKTAT DSIETALEED APGLLQILLD KGIVVKEIKL  540
YDVVEDDEML PDCTESDFQD LENVITKLFP QRTSLLKSVA KHGKGGKAIY CLACLISLIE  600
QSRYLQFRDC PVEWGWCRDL QSFIFVFKSH NRLVLERPEY GYATYFFEIL QSVPIEWQIR  660
RMVTAMKLSS CGRTALIENR PLLIGE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	473	478	RQRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	2e-36	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042540.15