PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042540.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 484aa    MW: 53313.2 Da    PI: 5.0906
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042540.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.67.5e-17231491128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                        lp+G +F+P+d++l+  +L++++ +        +  +e+ik  d       ++P+d+p  ++++ + ++fF+k+ + +++++   +   +  
  TRIDC4BG042540.13  23 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DIS 105
                        699************.667777666553454432..2233322233338899******.667788999*****9987755333..3...335 PP

                NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        W+++g +++++  +g l g+k+++++y + ++++++tdW +h+y++
  TRIDC4BG042540.13 106 WQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 149
                        ************.999***********.5677779*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    
CRCEATPAPE GIGGAAQQSW PGLPRGAQFN PSDSDLLWHL AAEMGNGLAH RHPFISEFIK  60
YGDEGARFGC THPRDMPGMR QDGHALHFFH KKVNLHNNEN DKDISWQKSG PSRSIILDGG  120
LQGCKEIFAL YAFKNSPQRT DWELHQYHIK NTMENEGELV LSKIFYKSQK CHCECASKAP  180
VQSAQDNSVT DDDSKEKEGA QLEKLSVNMA TESNFVEGNG NNREQMLVEM YPDQDKPCSL  240
KHVLDTADVN HENQINDQAE TELDHMSLQE RYRILLADMR SCSARVSAEK CALNDMGNSS  300
MQMDAETSGP VPKSESEEIN HGGTTYRECS VNGKEIPVED TEGPVNDKAF NSSAELLLSQ  360
TPACGDENVQ LAPRNSGTYL VDVKTEPALD GCAIYPSESP SVKFHHSNNN GLKVSGSLLE  420
CVPKDAEDSL PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ  480
RNKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1479484RQRNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-37NAC family protein