PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG042180.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 665aa MW: 71694.5 Da PI: 6.8387 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90 | 2.1e-28 | 184 | 237 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl TRIDC4BG042180.3 184 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 237 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.7 | 1.2e-12 | 186 | 236 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+ lG + +k+I + m+ g+t++++ s++qk++ TRIDC4BG042180.3 186 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 236 678**********************************************97 PP | |||||||
3 | Response_reg | 57.1 | 1e-19 | 24 | 108 | 26 | 109 |
EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++++++++ al++l+e++ +D+i+ D+ mp+m+G++ll+ e++lp+i+++a + +++ + +k Ga d+l Kp+ +eel + TRIDC4BG042180.3 24 ATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKN 108 5789999*******999999*******************87754.558***********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 665 aa Download sequence |
MLLYPIYVTV LFSAPLYDPF FCAATTCSQA TRALAMLREN RGAFDVIISD VHMPDMNGFR 60 LLELVGLEMD LPVIMMSADS RTDLVMKGIK HGACDYLIKP VRMEELKNIW QHVVRKKFGG 120 NKEHEHSGSL DDTDRNRLTN NDNEYASSAN DGAEDSWKSQ KKKRDKEEDD SELESGDPSN 180 NSKKPRVVWS VELHQQFVNA VNHLGIDKAV PKKILELMNV PGLTRENVAS HLQKFRLYLK 240 RIAQHHAGMT NPYGVPASSA QVASLGGLDF QALAASGQIP PQALAALQDE LLGRPTNSLV 300 LPGRDQSSLR LAAVKGNKPH GEQIAFGQPI YKVQNNSYAA LPQNSSAVGR MPSFSAWPNN 360 KLGMSDSMSA LGNVNNSQNS NMVLHELQQQ PDTMLSGTLH TLDVKPSGIV MPSQSLNTFP 420 ASEGLSPNQN SLIIPSQSSG FLTGIPPSMK PELVLPTSQS SNSLLGGIDL INQASTSQPF 480 ISSHGGNLPG LMNRNSNVMS SQGISSFQTG NTPYLVNQNP MGVGSKPPGV LKTESTDSLN 540 QSYAYANHID SGLLSSQSKN AQFGFLQSPN DVTGGWSSFQ NMDGYRNTVG PSQPVSSSSS 600 FQSSNAALGK LPDQGRGKNL GFVGKGTCIP NRFAVDEIES PTNSLSHSIG SSGDIPDMFG 660 FSGQM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 5e-92 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG042180.3 |