PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG041640.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 631aa MW: 68025.3 Da PI: 7.0941

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG041640.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.6	2e-15	284	343	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ +g ++ ++++lg ++ +++Aa+a++ a++k++g TRIDC4BG041640.3 284 SQYRGVTRHRWTGRYEAHLWDnSCKkDGqtRKgRQVYLGGYDNEDKAARAYDLAALKYWG 343 78*****************988898888446******99***********98 PP
2	AP2	46.8	7.1e-15	386	437	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TRIDC4BG041640.3 386 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFTTQEEAAEAYDVAAIKFRG 437 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MRAMASGGGN WLGFSLSPHM AMEVPSSEPD HAQAQPASAS AMSASPTNAA TCNLLFSQPA 60 QMAAPPPGYY YVGGAYGDGT STAGVYYSHH SVMPITSDGS LCIMEGMMPS SSPKLEDFLG 120 GGNGSGHDAV TYYSHHQQQQ DQQDQEASRI YQHHQQQLAP YNFQHLTETE AIYQETTAPM 180 DEAMAAAKNL LVTSYGSCYS NAGMQPLSLS MSPRSQSSSC VTAAPQQHQM AAAAAAAAAS 240 MAASQGGSNG GGEQCVGKKR GTGKGGQKQP VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA 300 HLWDNSCKKD GQTRKGRQVY LGGYDNEDKA ARAYDLAALK YWGASTNTNF PLENYREEVE 360 EMKSMTRQEF VAHLRRRSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFTT 420 QEEAAEAYDV AAIKFRGLNA VTNFDITRYD VDKIMESSSL LPGDEARKVR PIEAANHVPS 480 MHNGGGELSH AEEGSSGVWR MVLHGTPQQA AQCTPEVADL QKGFMDGDPR SSLHGNGIAG 540 FDVESAAHDI DVSGKINYSN SSSLVTSLSN SREGSPERFS LPSLYTKHPN AVSLATMSPW 600 MAMPAPTATH ALRGPNSSIP PMPVFAAWTD A

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MRAMASGGGN WLGFSLSPHM AMEVPSSEPD HAQAQPASAS AMSASPTNAA TCNLLFSQPA  60
QMAAPPPGYY YVGGAYGDGT STAGVYYSHH SVMPITSDGS LCIMEGMMPS SSPKLEDFLG  120
GGNGSGHDAV TYYSHHQQQQ DQQDQEASRI YQHHQQQLAP YNFQHLTETE AIYQETTAPM  180
DEAMAAAKNL LVTSYGSCYS NAGMQPLSLS MSPRSQSSSC VTAAPQQHQM AAAAAAAAAS  240
MAASQGGSNG GGEQCVGKKR GTGKGGQKQP VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA  300
HLWDNSCKKD GQTRKGRQVY LGGYDNEDKA ARAYDLAALK YWGASTNTNF PLENYREEVE  360
EMKSMTRQEF VAHLRRRSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFTT  420
QEEAAEAYDV AAIKFRGLNA VTNFDITRYD VDKIMESSSL LPGDEARKVR PIEAANHVPS  480
MHNGGGELSH AEEGSSGVWR MVLHGTPQQA AQCTPEVADL QKGFMDGDPR SSLHGNGIAG  540
FDVESAAHDI DVSGKINYSN SSSLVTSLSN SREGSPERFS LPSLYTKHPN AVSLATMSPW  600
MAMPAPTATH ALRGPNSSIP PMPVFAAWTD A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-111	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG041640.3