PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG041630.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 189aa MW: 20837.2 Da PI: 7.2158 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.7 | 1.9e-12 | 133 | 181 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + +k Ka++L + ++Y++sLq TRIDC4BG041630.2 133 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 181 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MYSPPCSAAG SNGERSFTAG ANPLALLDHA MDFDEHVLFP MHNAGMQDGV QFYNPTAGGT 60 ELSRNMSMEK GLKGGKRKGS GEGSSTMHSQ QEETGAMSQR EVSMERAGEK EGDGASNRED 120 YVHIRAKRGQ ATNNHSLAER FRREKINERM KHLQDLVPGC NKITGKAMML DEIINYVQSL 180 QRQVESSSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.1 | 4e-37 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG041630.2 |