PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG041570.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 143aa MW: 15923.1 Da PI: 7.3572 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57 | 3.2e-18 | 68 | 120 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ ++tkeq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ TRIDC4BG041570.5 68 RKKLRLTKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRAR 120 788899**********************************************8 PP | |||||||
2 | HD-ZIP_I/II | 85.5 | 7.3e-28 | 68 | 121 | 1 | 54 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rl+keq++lLE+ F+e+++L+p++Kv+la++L+l+prqv+vWFqnrRAR TRIDC4BG041570.5 68 RKKLRLTKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARL 121 69***************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
WEAAPSLEPS LTLSMPEDTT MTSTASGGVS SMSVGGAVKR ERAEEADLGE MVSSTAAGAE 60 EDDDGSTRKK LRLTKEQSAL LEDRFKEHST LNPKQKVALA KQLNLRPRQV EVWFQNRRAR 120 LVTLYYTRVY VYMILPLQLT VSC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 73 | TRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 2e-32 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG041570.5 |