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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRIDC4BG040690.5 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
BBR-BPC |
Protein Properties |
Length: 208aa MW: 22821.5 Da PI: 10.8194 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRIDC4BG040690.5 | genome | EnsemblPlants | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 303.1 | 1e-92 | 4 | 206 | 92 | 301 |
GAGA_bind 92 asalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad 184
++++p+g +++++++ +++lq+ ++++ +++eeek+ + +e+++++ k+ +kkrq++++pk +k kk+kk +++ ++ +++
TRIDC4BG040690.5 4 VHHHPTGFGMMPDARGAHTLQM-----MQPQEPPVPEEEKIAPPL-VEEHSVVGSKPPVKKRQQGRQPKLPKPKKPKK-VATPGEDGAPKARA 89
5899*****************9.....667777777888766555.556777788888888*****************.55666777777777 PP
GAGA_bind 185 erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGy 277
+rs+ + k +++v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP++tkrrgaRiagrKmSqgafkk+LekLa+eGy
TRIDC4BG040690.5 90 PRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGY 182
9******************************************************************************************** PP
GAGA_bind 278 dlsnpvDLkdhWAkHGtnkfvtir 301
+l+np+DLk++WAkHGtnkfvtir
TRIDC4BG040690.5 183 NLNNPIDLKTFWAKHGTNKFVTIR 206
***********************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 208 aa
Download sequence |
GHAVHHHPTG FGMMPDARGA HTLQMMQPQE PPVPEEEKIA PPLVEEHSVV GSKPPVKKRQ 60 QGRQPKLPKP KKPKKVATPG EDGAPKARAP RSRGPLKPVE MVINGIDFDI SRIPTPVCSC 120 TGAPQQCYRW GAGGWQSACC TTSISTYPLP MNTKRRGARI AGRKMSQGAF KKVLEKLAGE 180 GYNLNNPIDL KTFWAKHGTN KFVTIRRL
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