PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG040390.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 734aa    MW: 80935.6 Da    PI: 5.7459
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG040390.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.6e-082466347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT +E+e + +a +q G++ +++I  +++  +   q++++++ +
  TRIDC4BG040390.8 24 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 66
                      6*****************99.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    
MPLRPLRPIP VRSLAKKATR QWAAWTRQEE ESFFNALRQV GKNFEKITLR VQSKNKDQVR  60
HYYYRLVRRM KKLLGPGFSL DARNSKDTIA AMLRWWSLLE KFSCSASKLH LKPRRFKTFV  120
DALGNQLIKD RKRTRRKCSL GDTRLSSSSP VLSKTPGNQS FAVGLLPMDA QNGSKGASSK  180
GAFMKRVAES NSNKSGVIRG DLSATRTVRQ KRRAGGAGAC AAYKKWERAA MAGVSLVADA  240
AEELERKMTT QNLSCNADAT VLASSPNNVS TVDDAGTNHM KEADPQAPSK LKLQLFPINE  300
ATRKALEKDD HNPHLELTLS SKKKMSSVLE HLNRKWGNSN IACGELVLFP YCAHQEDLAT  360
YQRWTTQDTV AVADVFFSVN SPSIFRLRYG WFSLAELEAG LSEISLTRFE NCMIPEDIQV  420
KSSSEACVQK DGTLPSDFTS EQSSNNSKDQ SALLLGTPSS TGKNAAEEPS INTFPSQSGD  480
HNQEQVPANQ AFEVDPQMDC LAISEVDWAD TLTDISVGYL LTEASKAANL DCEVTSIAKN  540
PLFDENPCSY DSFDAAVALH ASRYQAAEQP AQTSHSTMWG AEETCDEFSF MLATARKQQG  600
LNTSASSPPD SDNEVHSSNS EGFQGFLQDL AGGDTPGNPC ADDVKAMEEL CARSPPQSDN  660
DFGLKDQPLD DAFWPESLGP LDLDIPPIRS LADEFILGDS QNSWSRMMEN SMDAFRNMSF  720
FVSDNNDSVL PPIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.21e-163MYB_related family protein