PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG040390.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 705aa MW: 77576.5 Da PI: 5.4851

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG040390.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.3e-08	43	85	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4BG040390.12 43 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 85 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MEKEVYEEMS PPPQPVDLPD ATPPSASDPS QKPAKKATRQ WAAWTRQEEE SFFNALRQVG 60 KNFEKITLRV QSKNKDQVRH YYYRLVRRMK KLLGPGFSLD ARNSKDTIAA MLRWWSLLEK 120 FSCSASKLHL KPRRFKTFVD ALGNQLIKDR KRTRRKCSLG DTRLSSSSPV LSKTPGNQSF 180 AVGLLPMDAQ NGSKGASSKG AFMKRVAESN SNKSGVIRGD LSATRTVRQK RRAGGAGACA 240 AYKKWERAAM AGVSLVADAA EELERKMTTQ NLSCNADATV LASSPNNVST VDDAGTNHMK 300 EADPQAPSKL KLQLFPINEA TRKALEKDDH NPHLELTLSS KKKMSSVLEH LNRKWGNSNI 360 ACGELVLFPY CAHQEDLATY QRWTTQDTVA VADVFFSVNS PSIFRLRYGW FSLAELEAGL 420 SEISLTRFEN CMIPEDIQVK SSSEACVQKD GTLPSDFTSE QSSNNSKDQS ALLLGTPSST 480 GKNAAEEPSI NTFPSQSGDH NQEQVPANQA FEVDPQMDCL AISEVDWADT LTDISVGYLL 540 TEASKAANLD CEVTSIAKNP LFDENPCSYD SFDAAVALHA SRYQAAEQPA QTSHSTMWGA 600 EETCDEFSFM LATARKQQGL NTSASSPPDS DNEVHSSNSE GFQGFLQDLA GGDTPGNPCA 660 DDVKAMEELC ARSPPQSDND FGLKDQPLDD AFWQTSYAEA YIFIF

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MEKEVYEEMS PPPQPVDLPD ATPPSASDPS QKPAKKATRQ WAAWTRQEEE SFFNALRQVG  60
KNFEKITLRV QSKNKDQVRH YYYRLVRRMK KLLGPGFSLD ARNSKDTIAA MLRWWSLLEK  120
FSCSASKLHL KPRRFKTFVD ALGNQLIKDR KRTRRKCSLG DTRLSSSSPV LSKTPGNQSF  180
AVGLLPMDAQ NGSKGASSKG AFMKRVAESN SNKSGVIRGD LSATRTVRQK RRAGGAGACA  240
AYKKWERAAM AGVSLVADAA EELERKMTTQ NLSCNADATV LASSPNNVST VDDAGTNHMK  300
EADPQAPSKL KLQLFPINEA TRKALEKDDH NPHLELTLSS KKKMSSVLEH LNRKWGNSNI  360
ACGELVLFPY CAHQEDLATY QRWTTQDTVA VADVFFSVNS PSIFRLRYGW FSLAELEAGL  420
SEISLTRFEN CMIPEDIQVK SSSEACVQKD GTLPSDFTSE QSSNNSKDQS ALLLGTPSST  480
GKNAAEEPSI NTFPSQSGDH NQEQVPANQA FEVDPQMDCL AISEVDWADT LTDISVGYLL  540
TEASKAANLD CEVTSIAKNP LFDENPCSYD SFDAAVALHA SRYQAAEQPA QTSHSTMWGA  600
EETCDEFSFM LATARKQQGL NTSASSPPDS DNEVHSSNSE GFQGFLQDLA GGDTPGNPCA  660
DDVKAMEELC ARSPPQSDND FGLKDQPLDD AFWQTSYAEA YIFIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-148	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG040390.12