PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG039680.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 250aa    MW: 26117.6 Da    PI: 7.8624
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG039680.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.12e-40261261100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                       +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+a
  TRIDC4BG039680.2  26 PCGACKFLRRKCVSECIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLQIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQA 118
                       7***********************9989***************************************************************** PP

            DUF260  93 elallkee 100
                       el +l+++
  TRIDC4BG039680.2 119 ELTYLQTH 126
                       **999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
CGGPSGSGSG SGGVGGGGLG GGGGGPCGAC KFLRRKCVSE CIFAPYFDSE QGAAHFAAVH  60
KVFGASNVSK LLLQIPAHKR LDAVVTICYE AQARLRDPVY GCVAHIFALQ QQVVNLQAEL  120
TYLQTHLATL ELPSPPLPAA PQMPMAMPAQ FSISDLPSTT NIPTTIDLSA LFEPPAQPQW  180
AVQQHHQHQL RQHPSYGAMA HRGGSSMAEG SAASGSGSGD LQTLARELLD RHGRSGVKPE  240
LQPPPPPHPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00220.12e-63LBD family protein