PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG039680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 136aa MW: 13710.6 Da PI: 8.2902 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 126.7 | 1.1e-39 | 34 | 132 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq++ l + TRIDC4BG039680.1 34 PCGACKFLRRKCVSECIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLQIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVSLLWE 126 7***********************9989***************************************************************99 PP DUF260 93 elallk 98 e++++k TRIDC4BG039680.1 127 EINTAK 132 999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
GGSSTLGGCG GPSGSGSGSG GVGGGGLGGG GGGPCGACKF LRRKCVSECI FAPYFDSEQG 60 AAHFAAVHKV FGASNVSKLL LQIPAHKRLD AVVTICYEAQ ARLRDPVYGC VAHIFALQQQ 120 VSLLWEEINT AKPSNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45420.1 | 3e-53 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG039680.1 |