PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG039440.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 208aa MW: 23680.3 Da PI: 9.3759 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 170.3 | 2.2e-53 | 44 | 149 | 1 | 101 |
NF-YC 1 qlksfwekq.....iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdi 88 ql++fw++q + +a+dfknh+lPlarikki+kadedv+misaeaPvl++kacelfilelt+rswlhaeenkrrtl+++d+aaa++rtd+ TRIDC4BG039440.3 44 QLQAFWAYQrqeaeRASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDVAAAIARTDV 136 89*****997665555689************************************************************************** PP NF-YC 89 fdflvdivprdel 101 fdflvdivpr+el TRIDC4BG039440.3 137 FDFLVDIVPREEL 149 **********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MENHQLPYTT QPPATGAAGG APVPGVPGPP PVPHHHLLQQ QQAQLQAFWA YQRQEAERAS 60 ASDFKNHQLP LARIKKIMKA DEDVRMISAE APVLFAKACE LFILELTIRS WLHAEENKRR 120 TLQRNDVAAA IARTDVFDFL VDIVPREELR RGRARVHGRP WWLSWLPSWT SKLRVIDARA 180 VCAHWILNAV YHGAQCNCNC VSIWHVLR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 119 | 125 | RRTLQRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 7e-63 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG039440.3 |