PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG038940.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 633aa MW: 70463.6 Da PI: 8.252 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.9 | 1.2e-26 | 39 | 129 | 1 | 88 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY+ YA+++GF++r+s+ ++s+r+++i++r+ vCskeg++e+++ + ++++++r+ tr+gCka++++kk gkw+vtk+++ HnH TRIDC4BG038940.8 39 EFYSLYARHAGFRIRISRYTRSRRDNSIISRRIVCSKEGFHETRNCEglhPDQKQQERTGTRVGCKAMIMIKKFGPGKWVVTKFVKTHNHG 129 6*******************************************9999999999************************************6 PP | |||||||
2 | FAR1 | 89.5 | 4.5e-28 | 177 | 269 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA+ GF+ r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4BG038940.8 177 FYINYARLNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 269 9*****************************************99999998899999**********************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 633 aa Download sequence |
MEISSNEPSE VENIIGHEDD TELTPCEGME FESEDAAREF YSLYARHAGF RIRISRYTRS 60 RRDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK KFGPGKWVVT 120 KFVKTHNHGS VPPRKLDIRS AHQDLNPIEK PHSTEVNPVD EPVEGMEFDS EEAAKLFYIN 180 YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG 240 CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQSTDSLTV LYNKLCQEAI KFAKEGSVTE 300 EIYHVAMSAL KEAAEKVAQV KSCHPIMPHR GVSGSESKHK VVQMKTMSAS QCSDVAKQKT 360 IPSQLTMFQE STSKLMFIPT NLLTDSGLAN SDNNHPSSCA FTSSGRQGRH GSECSYLHAE 420 NRKEGCPEKY QNSTSSRATQ GNHSTYHGHS EETTVAIPAI PLTLYMPLSR NSPGASADGQ 480 YKLLAAPIEA VPISYRPAEP IRQPKRSFCN LGPLPGVMSE LTRREKGPHP LVHATALACG 540 ARVVPVEEAA SLIKAIESKI RSGGAKIARL PSSRLTRLVP EAVSMSSSSE DGEENDHSEP 600 PAVNVEGYCH DDQISEEMKL QGEASELETD SEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 2e-29 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG038940.8 |