PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG038610.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 406aa MW: 43386.7 Da PI: 5.8089

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG038610.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.6	2.6e-14	203	249	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riNs +++Lr+llP+ +K +Ka+ L ++++++k+L TRIDC4BG038610.2 203 KSHSEAERRRRERINSHLARLRSLLPNT-----TKTDKASLLAEVIQHVKEL 249 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGAHGDRRRH RREEVGVLLD EEEEELEHHA RACGGATSGL VDQELGGCQE GGGGMVFEAS 60 SSVGSVSATM GPPPIMCWPP PAPSLSPQEP LHGAIHHHHN IGIGGQGPFF PLLPPLPPQP 120 PPPPPFLADF YARRALQFAY DHSGGASSSS DPLGFGAGLY MGHHGSPVHG MMMAPPFGAS 180 PFSDFGRMTA QEIMDAKALA ASKSHSEAER RRRERINSHL ARLRSLLPNT TKTDKASLLA 240 EVIQHVKELK RQTSEIREEA CPLPTEADEL TVDASSDEDG RLLVRASLCC DDRPDLLPDL 300 IRALKALRLR ALKAEITTLG GRVKNVLVVT EDDSIACDGD QQDEDGNMQA PMSPQHAVAS 360 IQEALRAVME RTSSSSGAED SGGSASGGLK RQRTTSLSAI LENRSI

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGAHGDRRRH RREEVGVLLD EEEEELEHHA RACGGATSGL VDQELGGCQE GGGGMVFEAS  60
SSVGSVSATM GPPPIMCWPP PAPSLSPQEP LHGAIHHHHN IGIGGQGPFF PLLPPLPPQP  120
PPPPPFLADF YARRALQFAY DHSGGASSSS DPLGFGAGLY MGHHGSPVHG MMMAPPFGAS  180
PFSDFGRMTA QEIMDAKALA ASKSHSEAER RRRERINSHL ARLRSLLPNT TKTDKASLLA  240
EVIQHVKELK RQTSEIREEA CPLPTEADEL TVDASSDEDG RLLVRASLCC DDRPDLLPDL  300
IRALKALRLR ALKAEITTLG GRVKNVLVVT EDDSIACDGD QQDEDGNMQA PMSPQHAVAS  360
IQEALRAVME RTSSSSGAED SGGSASGGLK RQRTTSLSAI LENRSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	214	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	7e-44	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG038610.2