PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG035480.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 223aa    MW: 24005.3 Da    PI: 6.0985
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG035480.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.18.2e-40521511100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrr+Ca++C+lapyfp ++p+kf  +h++FGasn++kll+ lpe+ r da+ss+vyeAear+rdPvyG++g + +lq++ ++lk++
  TRIDC4BG035480.2  52 PCAACKLLRRRCADGCMLAPYFPPTEPAKFTTAHRVFGASNIIKLLQVLPESSRADAVSSMVYEAEARLRDPVYGCAGAVCRLQKEANELKVD 144
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       la++++ 
  TRIDC4BG035480.2 145 LARAQAD 151
                       **99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MDYSNEATIT AATQPYVRSM SPPSRVSSCS PPPVFPLMGN APSSPPTIVL SPCAACKLLR  60
RRCADGCMLA PYFPPTEPAK FTTAHRVFGA SNIIKLLQVL PESSRADAVS SMVYEAEARL  120
RDPVYGCAGA VCRLQKEANE LKVDLARAQA DLLSIQTQHA NLLALVCVEF AANHRGDQQL  180
HQPPPLGDQL NGIGGSGGGA MYQPLYDSDF DSAAWEEARQ LWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.19e-62LBD family protein