PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG034110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 337aa    MW: 36931.3 Da    PI: 9.3531
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG034110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.35e-1059115155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV+++++++r++A+++d  +   g krk  + g +  ++ Aa+a++ a++k++g
  TRIDC4BG034110.2  59 SCYRGVTRHRWTKRYEAHLWDnTCRrEGqKRKGRQGG-YEKEDRAARAYDLAALKYWG 115
                       79*******************5555444666888866.5555*************987 PP
2AP251.32.9e-16158209155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a++k++g
  TRIDC4BG034110.2 158 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAALKFRG 209
                       78****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
APPPPPPLGA DPGRLLLESS RNDAHASTGL AVAAPVETTG SPSALAPLPL TPSSGQRTSC  60
YRGVTRHRWT KRYEAHLWDN TCRREGQKRK GRQGGYEKED RAARAYDLAA LKYWGVNATT  120
NFPKENYIRE LEEMQNMSRQ ELVASLRRKS SGFSRGASVY RGVTRHHQHG RWQARIGRVA  180
GNKDLYLGTF ATEEEAAEAY DIAALKFRGD NAVTNFEPSR YNLEAIARSD LPVNGRRMSS  240
HKPAAAPAPE AQGEITFVSS ALPIPQQSGS DVQVPPYVLH GLLQLQASEP LHALPLSSYS  300
FGEPSFYWPF GDVEQKVQLD SKVEVAGGIL QLANSAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.27e-68AP2 family protein