PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG034110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 259aa MW: 28593.1 Da PI: 7.1618 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.9 | 1.9e-16 | 80 | 131 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a++k++g TRIDC4BG034110.1 80 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAALKFRG 131 78****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
LIIWRLCGGF SSVYLGGYEK EDRAARAYDL AALKYWGVNA TTNFPKENYI RELEEMQNMS 60 RQELVASLRR KSSGFSRGAS VYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFATEEEAAE 120 AYDIAALKFR GDNAVTNFEP SRYNLEAIAR SDLPVNGRRM SSHKPAAAPA PEAQGEITFV 180 SSALPIPQQS GSDVQVPPYV LHGLLQLQAS EPLHALPLSS YSFGEPSFYW PFGDVEQKVQ 240 LDSKVEVAGG ILQLANSAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65510.1 | 3e-58 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG034110.1 |