PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG026900.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 351aa MW: 38524.2 Da PI: 5.1887

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG026900.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	107.9	7.3e-34	70	169	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 lfqrlw+eeDeiv+L+++ +f+a++g+ +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg+ +sf+++h+q +fe TRIDC4BG026900.1 70 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRCSGNTFSFRSPHEQAVFE 162 79***********************9977778***********************************8889************ PP DUF573 91 lskkiWg 97 +++ iW+ TRIDC4BG026900.1 163 IARNIWR 169 ****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
RSDPMLPMVD DPSAAGAAAS SSFPDADAYG NGDSEDIDFP VDPIPNPPFS SAPVAAPASA 60 TATVGERRPL FQRLWTEEDE IVILRAFAEF TAQRGTAFAS HQYDTEPFYE EMRRRLQLDF 120 SKSQLAEKLR RLKRKYRNCV ERLRCSGNTF SFRSPHEQAV FEIARNIWRP SSDKHGRDPN 180 AADSEDDATI TATNAAANGD AKSPSSSKAH RRGRRRRTAD LAADASEAPQ PYTSGPMPVK 240 TEDSLPAFFP HVSMDGAEPV VAPVVNTESS VLTPLFKEMV RAMLGIGGCP SPLGLGAKVP 300 EQPSAILGIP MEGEKWRQQR ILELEVYLRR IDLLQDEVKS ALEELKSTPP S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

RSDPMLPMVD DPSAAGAAAS SSFPDADAYG NGDSEDIDFP VDPIPNPPFS SAPVAAPASA  60
TATVGERRPL FQRLWTEEDE IVILRAFAEF TAQRGTAFAS HQYDTEPFYE EMRRRLQLDF  120
SKSQLAEKLR RLKRKYRNCV ERLRCSGNTF SFRSPHEQAV FEIARNIWRP SSDKHGRDPN  180
AADSEDDATI TATNAAANGD AKSPSSSKAH RRGRRRRTAD LAADASEAPQ PYTSGPMPVK  240
TEDSLPAFFP HVSMDGAEPV VAPVVNTESS VLTPLFKEMV RAMLGIGGCP SPLGLGAKVP  300
EQPSAILGIP MEGEKWRQQR ILELEVYLRR IDLLQDEVKS ALEELKSTPP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-43	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG026900.1