PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG025790.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 501aa MW: 53502.4 Da PI: 8.6173

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG025790.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.3	8.4e-30	219	275	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa +++++i+Y+g+Hnh+ TRIDC4BG025790.6 219 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 275 8**************************************.9************8 PP
2	WRKY	101.8	4.1e-32	385	443	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC vkk++er+++dp++v++tYeg+H h+ TRIDC4BG025790.6 385 LDDGYRWRKYGQKVVKGNPHPRSYYKCTYQGCGVKKHIERCSQDPTAVITTYEGKHSHD 443 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
RPLRKCSAHH LSFLMAAHEA SAGGGEGARC TPPRPALSLP PRSAVESFFG SGATAASFAE 60 TSPGPVTLAA ALFPDMPSSA FHGSFTQLLV GAMGSPAAPP FPPSPFAVPP GLSPTALVGP 120 PSLFSPMGNF EMSHQQALAQ VTAQAVHSQY TVGSQADYSL PFSSATSALT SQFIKSSANV 180 TSMKETATLP LHTVNDNLKS NEVSQGFQTL ALTVDKPADD GYNWRKYGQK AVKGGEYPRS 240 YYKCTQASCP VKKKVEHSAY GQITQIIYRG QHNHQRPPKR RSKDGGNLLN EDDFPENRDA 300 LTRSEPGSQD HSGKVEVSND GITGLSMSKR RDGGDKSSGS SDREEDNDEA GDDNGDAGIV 360 NANKRHVPVP AQRIIVQTTS EIDLLDDGYR WRKYGQKVVK GNPHPRSYYK CTYQGCGVKK 420 HIERCSQDPT AVITTYEGKH SHDVPAARSS VAAAASANAS SSISLLHRGQ KAASSSQRVL 480 PRAAVHTSDS SLQLKEENEI T

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

RPLRKCSAHH LSFLMAAHEA SAGGGEGARC TPPRPALSLP PRSAVESFFG SGATAASFAE  60
TSPGPVTLAA ALFPDMPSSA FHGSFTQLLV GAMGSPAAPP FPPSPFAVPP GLSPTALVGP  120
PSLFSPMGNF EMSHQQALAQ VTAQAVHSQY TVGSQADYSL PFSSATSALT SQFIKSSANV  180
TSMKETATLP LHTVNDNLKS NEVSQGFQTL ALTVDKPADD GYNWRKYGQK AVKGGEYPRS  240
YYKCTQASCP VKKKVEHSAY GQITQIIYRG QHNHQRPPKR RSKDGGNLLN EDDFPENRDA  300
LTRSEPGSQD HSGKVEVSND GITGLSMSKR RDGGDKSSGS SDREEDNDEA GDDNGDAGIV  360
NANKRHVPVP AQRIIVQTTS EIDLLDDGYR WRKYGQKVVK GNPHPRSYYK CTYQGCGVKK  420
HIERCSQDPT AVITTYEGKH SHDVPAARSS VAAAASANAS SSISLLHRGQ KAASSSQRVL  480
PRAAVHTSDS SLQLKEENEI T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	281	RPPKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.2	6e-77	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG025790.6