PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG025790.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 311aa    MW: 33837.4 Da    PI: 8.2163
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG025790.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.1e-30124180259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa  +++++i+Y+g+Hnh+
  TRIDC4BG025790.5 124 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 180
                       8****************************************.9**************8 PP
2WRKY35.61.8e-11290311122
                       ---SS-EEEEEEE--TT-SS-E CS
              WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                       ldDgy+WrKYGqK+vkg+++pr
  TRIDC4BG025790.5 290 LDDGYRWRKYGQKVVKGNPHPR 311
                       59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
PAAPPFPPSP FAVPPGLSPT ALVGPPSLFS PMGNFEMSHQ QALAQVTAQA VHSQYTVGSQ  60
ADYSLPFSSA TSALTSQFIK SSANVTSMKE TATLPLHTVN DNLKSNEVSQ GFQTLALTVD  120
KPADDGYNWR KYGQKAVKGG EYPRSYYKCT QASCPVKKKV EHSAYGQITQ IIYRGQHNHQ  180
RPPKRRSKDG GNLLNEDDFP ENRDALTRSE PGSQDHSGKV EVSNDGITGL SMSKRRDGGD  240
KSSGSSDREE DNDEAGDDNG DAGIVNANKR HVPVPAQRII VQTTSEIDLL DDGYRWRKYG  300
QKVVKGNPHP R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181186RPPKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.14e-54WRKY family protein