PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG025790.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 444aa    MW: 47747 Da    PI: 8.3482
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG025790.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.67.1e-30157213259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa  +++++i+Y+g+Hnh+
  TRIDC4BG025790.3 157 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 213
                       8****************************************.9**************8 PP
2WRKY90.41.4e-28323386159
                       ---SS-EEEEEEE--TT-SS-.....EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefp.....rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vkg+++p     rsYY+Ct++gC vkk++er+++dp++v++tYeg+H h+
  TRIDC4BG025790.3 323 LDDGYRWRKYGQKVVKGNPHPscalyRSYYKCTYQGCGVKKHIERCSQDPTAVITTYEGKHSHD 386
                       59******************9999999************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
PGPVTLAAAL FPDMPSSAFH GSFTQLLVGA MGSPAAPPFP PSPFAVPPGL SPTALVGPPS  60
LFSPMGNFEM SHQQALAQVT AQAVHSQYTV GSQADYSLPF SSATSALTSQ FIKSSANVTS  120
MKETATLPLH TVNDNLKSNE VSQGFQTLAL TVDKPADDGY NWRKYGQKAV KGGEYPRSYY  180
KCTQASCPVK KKVEHSAYGQ ITQIIYRGQH NHQRPPKRRS KDGGNLLNED DFPENRDALT  240
RSEPGSQDHS GKVEVSNDGI TGLSMSKRRD GGDKSSGSSD REEDNDEAGD DNGDAGIVNA  300
NKRHVPVPAQ RIIVQTTSEI DLLDDGYRWR KYGQKVVKGN PHPSCALYRS YYKCTYQGCG  360
VKKHIERCSQ DPTAVITTYE GKHSHDVPAA RSSVAAAASA NASSSISLLH RGQKAASSSQ  420
RVLPRAAVHT SDSSLQLKEE NEIT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214219RPPKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-71WRKY family protein