PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG025790.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 275aa MW: 30266.2 Da PI: 8.5974 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.6 | 3.4e-30 | 88 | 144 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa +++++i+Y+g+Hnh+ TRIDC4BG025790.10 88 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 144 8****************************************.9**************8 PP | |||||||
2 | WRKY | 35.8 | 1.6e-11 | 254 | 275 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vkg+++pr TRIDC4BG025790.10 254 LDDGYRWRKYGQKVVKGNPHPR 275 59*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MSHQQALAQV TAQAVHSQYT VGSQADYSLP FSSATSALTS QFIKSSANVT SMKETATLPL 60 HTVNDNLKSN EVSQGFQTLA LTVDKPADDG YNWRKYGQKA VKGGEYPRSY YKCTQASCPV 120 KKKVEHSAYG QITQIIYRGQ HNHQRPPKRR SKDGGNLLNE DDFPENRDAL TRSEPGSQDH 180 SGKVEVSNDG ITGLSMSKRR DGGDKSSGSS DREEDNDEAG DDNGDAGIVN ANKRHVPVPA 240 QRIIVQTTSE IDLLDDGYRW RKYGQKVVKG NPHPR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 145 | 150 | RPPKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 2e-50 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG025790.10 |