PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG025790.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 275aa    MW: 30266.2 Da    PI: 8.5974
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG025790.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.63.4e-3088144259
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa  +++++i+Y+g+Hnh+
  TRIDC4BG025790.10  88 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 144
                        8****************************************.9**************8 PP
2WRKY35.81.6e-11254275122
                        ---SS-EEEEEEE--TT-SS-E CS
               WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                        ldDgy+WrKYGqK+vkg+++pr
  TRIDC4BG025790.10 254 LDDGYRWRKYGQKVVKGNPHPR 275
                        59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MSHQQALAQV TAQAVHSQYT VGSQADYSLP FSSATSALTS QFIKSSANVT SMKETATLPL  60
HTVNDNLKSN EVSQGFQTLA LTVDKPADDG YNWRKYGQKA VKGGEYPRSY YKCTQASCPV  120
KKKVEHSAYG QITQIIYRGQ HNHQRPPKRR SKDGGNLLNE DDFPENRDAL TRSEPGSQDH  180
SGKVEVSNDG ITGLSMSKRR DGGDKSSGSS DREEDNDEAG DDNGDAGIVN ANKRHVPVPA  240
QRIIVQTTSE IDLLDDGYRW RKYGQKVVKG NPHPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145150RPPKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.12e-50WRKY family protein