PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG025790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 340aa    MW: 36757.7 Da    PI: 8.2241
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG025790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.8e-30149205259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa  +++++i+Y+g+Hnh+
  TRIDC4BG025790.1 149 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 205
                       8****************************************.9**************8 PP
2WRKY36.97.4e-12315337123
                       ---SS-EEEEEEE--TT-SS-EE CS
              WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                       ldDgy+WrKYGqK+vkg+++pr+
  TRIDC4BG025790.1 315 LDDGYRWRKYGQKVVKGNPHPRG 337
                       59*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
ALFPDMPSSA FHGSFTQLLV GAMGSPAAPP FPPSPFAVPP GLSPTALVGP PSLFSPMGNF  60
EMSHQQALAQ VTAQAVHSQY TVGSQADYSL PFSSATSALT SQFIKSSANV TSMKETATLP  120
LHTVNDNLKS NEVSQGFQTL ALTVDKPADD GYNWRKYGQK AVKGGEYPRS YYKCTQASCP  180
VKKKVEHSAY GQITQIIYRG QHNHQRPPKR RSKDGGNLLN EDDFPENRDA LTRSEPGSQD  240
HSGKVEVSND GITGLSMSKR RDGGDKSSGS SDREEDNDEA GDDNGDAGIV NANKRHVPVP  300
AQRIIVQTTS EIDLLDDGYR WRKYGQKVVK GNPHPRGVGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206211RPPKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-51WRKY family protein