PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG025460.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 58aa MW: 6660.87 Da PI: 5.6797 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.6 | 1.5e-05 | 3 | 33 | 22 | 55 |
HHHCTSCCC...TTS-STCHHHHHHHH..HHHHHHH CS HLH 22 eLrellPkaskapskKlsKaeiLekAv..eYIksLq 55 L++l+P++ K +Ka++L +A+ eY+k+Lq TRIDC4BG025460.2 3 ALQSLIPNS-----NKTDKASMLDEAIliEYLKQLQ 33 7999***97.....6***********555******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 58 aa Download sequence |
MKALQSLIPN SNKTDKASML DEAILIEYLK QLQLQVQVSK CMSQWLVDVE TNLLVHLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 6e-12 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG025460.2 |