PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG022740.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 265aa MW: 29526.9 Da PI: 6.9487 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 38 | 85 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC4BG022740.2 38 RGPWTVDEDLTLINYIADHGEGRWNALARAAGLRRTGKSCRLRWLNYL 85 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.9 | 9.9e-18 | 91 | 134 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC4BG022740.2 91 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 134 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
WRVLQKILLS TSSMDVVLQS RSSNSMAAEP EEEAELRRGP WTVDEDLTLI NYIADHGEGR 60 WNALARAAGL RRTGKSCRLR WLNYLRPDVK RGNFTADEQL LILDLHSRWG NRWSKIAQHL 120 PGRTDNEIKN YWRTRVQKHA KQLNCDVGSA TFKDAMRYLW MPHLVERIHA AAATAGGDPT 180 MGDTSCASGV TSMAATATTY PDNNSPASAV TTSRSASSGS FTSELCGEEK NLQVHGSGEK 240 TTSGGDWMQD ADQEFWAMHM QIQPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 1e-67 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG022740.2 |