PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG022520.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 157aa MW: 17845.4 Da PI: 9.013 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.5 | 8.7e-10 | 3 | 27 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Iar+++ gRt++++k++w++++ TRIDC4BG022520.5 3 RWSRIARRLP-GRTDNEIKNYWRTHM 27 4*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MYRWSRIARR LPGRTDNEIK NYWRTHMRKK AQERKTNMSP SSSSSSFTYQ SCLLETAPII 60 RMDGGSTHNG TTCFSSVLKS NQSVMDGYSM DQIWKEIEAP AMLPIDKKAC SNLPCPVLPS 120 PMGDRYCPPE VVWKMDNGDL KMLAPQFGYG NGERSCY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.1 | 7e-23 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG022520.5 |