PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 807aa    MW: 88559.6 Da    PI: 6.1035
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.53.8e-1024227971373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4BG022100.1 422 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYQSLVAKSTS---VGEFLRAYKLYMAASSFRKV 511
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4BG022100.1 512 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPGLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFKYHG-IPA 603
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL+ +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4BG022100.1 604 KLETVHAEDLNIDPDEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLSNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 696
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4BG022100.1 697 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 789
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4BG022100.1 790 VLYAMSTW 797
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    
MAATPDEFLR AGDFLADAEP FSPSLFLDLP PTPSPPRAPF APASDDLDFI SRMLMEEDID  60
DKFFYQYPDH PAILSAQHRF AQIISDSNTT PSTDDSANTT VASSTFSSDS ATARSTSSCS  120
DSATNTAKST SSSHSATNTA NSTSCSSSPG GFGPANPTWP YERIDLSQPL QSRPYIGLGF  180
PVDDANNLLF SGVCTPTAGY FGHAPALSKG NNDHFVAPAG QNGRGTGIQS FAAFSNSSAA  240
KTLSNNGTEK AAKPATPPVC RGGPGTPASA FFSGQADGDM DMLNMAFRKG MEEANKFLPT  300
NNTLDAISNR PALRDFTCDQ LKKEEVDRLR MLMFSNGRGR KNRHGVEDLE AEAGRRSKLM  360
MPEQEESGVG EMVEEIMLHG HDIIMKGIED LHIAMGTEAE KNHRKGTGKA ARGRRGASEV  420
DLRTMLIHCA QAVATGDHRG SNELLRQIKQ HSSPKGDATQ RLAYCFAEGL EARLAGTGSH  480
VYQSLVAKST SVGEFLRAYK LYMAASSFRK VNFIFVGKII MDAMVGKSRL HIVDYNVEYG  540
FQWPGLLQML AEREGGPPEV RITGIDVPQP GFRPAFQIEE TGRRLSKCAQ EFGVPFKYHG  600
IPAKLETVHA EDLNIDPDEV LIVTSQCGFS NLMDESVIMD RQDIPSPRDM VLSNIRNMRP  660
DVFIDCVVNG TYSAPFFVTR FREALFTYSA QFDMLDATIP RDNDDRLLIE RDIFGPCALN  720
VIACEGADRV DRPETYKQWQ VRGHRAGLRQ VPLSSAVVKL VKDKVKSLYH KDFLIDVDNR  780
WLLQGWKGRV LYAMSTWVAG DHDNSKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-139GRAS family protein