PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022090.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 676aa    MW: 75080.2 Da    PI: 6.955
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS335.59.9e-1032996702373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+cA+a+s+++ + a +lL+r+++++sp+gd+ qRla+yf+++L+arla+ +sely++l  s+ s   +++ l+a +l+  ++ + k++
  TRIDC4BG022090.1 299 HTLLLNCAQALSTDNRHSAVELLKRIRQHSSPKGDAGQRLAHYFANGLEARLAGRGSELYQSLLLSRIS---VADFLKANQLYMAACCCKKVA 388
                       679************************************************************999998...********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ a ++I +av+g++r+Hi+D++++qGlQWp Ll+ La+R++gpp++RiTg++ p++g   +  +eetg+rL++fA+ +gvpf+f+  +  +
  TRIDC4BG022090.1 389 YIFADKTICNAVAGKRRLHIVDYGLNQGLQWPGLLRMLAAREGGPPEVRITGIDLPQPGfhGAYHIEETGRRLRNFARVFGVPFKFRG-IPAK 480
                       **********************************************************999999************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        e++++e+L+++++E+l+V +  q  +l+des+  +   +rd+vL+ +k+++P+v+++   + +++++sFl+rf eal +ysa fd l++++p
  TRIDC4BG022090.1 481 RETVRPEDLNIDRDEVLVVISLCQFRHLMDESLGFDGpsPRDQVLNNIKKMRPDVFIHGIMNGSYGATSFLTRFREALFHYSAQFDLLDTTVP 573
                       9*******************************98876669***************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++e r  +Er ++gr+  nv+acega+r+er et+++W+ r ++aG++++pl+ +++k +   ++  + + + v+ ++ +l+  Wk+r L++
  TRIDC4BG022090.1 574 RDNEGRLLLERDIFGRSCLNVLACEGADRVERPETYKQWQLRNHRAGLRQLPLNPEVVKLVLDKVKDNYHRNFVVDADQRWLLHRWKGRVLYA 666
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                        S+W
  TRIDC4BG022090.1 667 WSSW 670
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    
MAATPEEFLG QQGFLARLEP PSPSLFLDLP PTPRGGHDDD GHSSFDDMVL PYISRLLMEE  60
GTEDHLFYLY PNHPAVLRAQ QPFAQILVDV ADSASASTST PSPSSSSDAT ASTTPSTATA  120
SASASASPDD APVQISRPSY TDVNGHASAS PDNQSSGLLN GDEMAKQPSS DLFNHLLPGD  180
QDMLNLAFLK GMEEARKFLP PDISLPPIKE GTVVGGGNAA SLKKKRAAPA LEPDVGRPSK  240
LMMPEQEVRN MFDEMMFQEH EICMKGTLQN LNGEPEKSSR KKGRSRKTTV DDSEMVDLHT  300
LLLNCAQALS TDNRHSAVEL LKRIRQHSSP KGDAGQRLAH YFANGLEARL AGRGSELYQS  360
LLLSRISVAD FLKANQLYMA ACCCKKVAYI FADKTICNAV AGKRRLHIVD YGLNQGLQWP  420
GLLRMLAARE GGPPEVRITG IDLPQPGFHG AYHIEETGRR LRNFARVFGV PFKFRGIPAK  480
RETVRPEDLN IDRDEVLVVI SLCQFRHLMD ESLGFDGPSP RDQVLNNIKK MRPDVFIHGI  540
MNGSYGATSF LTRFREALFH YSAQFDLLDT TVPRDNEGRL LLERDIFGRS CLNVLACEGA  600
DRVERPETYK QWQLRNHRAG LRQLPLNPEV VKLVLDKVKD NYHRNFVVDA DQRWLLHRWK  660
GRVLYAWSSW VAADAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-134GRAS family protein