PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022050.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 497aa    MW: 56414.8 Da    PI: 9.0936
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS328.61.2e-1001214922373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cAeavss+d + a++lL+r++ ++sp+gd+ qRla+yf+++L+arla+++s+ly+al  ++t    ++e ++a++l   ++  +k++
  TRIDC4BG022050.1 121 ETLLIRCAEAVSSNDVRGASKLLERIKWHSSPTGDAKQRLAHYFAQGLEARLAGTGSRLYRALMGKHTL---TVELIKAYHLHMAACCSIKVG 210
                       789************************************************************999997...8******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                        l a ++I +av+g +++Hi+ ++i+ G+QWp Ll+ La+R++gpp++RiTg++ p++g   ++ +ee g+rL++ A+++gvpfef++ +a++
  TRIDC4BG022050.1 211 LLFAINTICKAVAGRRKLHIVHYGITTGFQWPDLLRLLANREGGPPQVRITGINTPRPGlrPAQIMEEAGDRLSNCARQFGVPFEFRA-IASK 302
                       **********************************************************9*99**************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       led++ e+L+++p+E+l+Vn+ ++  +l+des++ +    rd vL+ + +++P v+v +  +  ++++ F++rf +al+y++alfd +e+++p
  TRIDC4BG022050.1 303 LEDVRAEDLHIDPDEVLVVNSLYEFRTLMDESLTFDMvsLRDMVLNNISKMRPGVFVQSLVNGPYSAAFFMTRFRHALYYFTALFDVMENTVP 395
                       *******************************987655449***************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++++r  vEr +++r++ n++acega+r+er +++++W++r e+aG++++pl+ +++   k  ++  + + +++ e++ +l++gWk+r L++
  TRIDC4BG022050.1 396 RDNDQRLLVERDIFARSAINMIACEGADRVERPQNYKEWQARNERAGLRQLPLDPDVVLILKDQVKSRYHKHFMISEDHRWLLQGWKGRVLYA 488
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC4BG022050.1 489 HSTW 492
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MLSSMAFFKG MEEANRFLPA DNVMVADRGR KKRWSGMDAE TEAGLGRSSK QITALPRSVS  60
EEEEETTALE MLDRLVLNGY DAHPGEMQEV VRVTLEDKEN KAAVGRRGRR GARHTVVTDL  120
ETLLIRCAEA VSSNDVRGAS KLLERIKWHS SPTGDAKQRL AHYFAQGLEA RLAGTGSRLY  180
RALMGKHTLT VELIKAYHLH MAACCSIKVG LLFAINTICK AVAGRRKLHI VHYGITTGFQ  240
WPDLLRLLAN REGGPPQVRI TGINTPRPGL RPAQIMEEAG DRLSNCARQF GVPFEFRAIA  300
SKLEDVRAED LHIDPDEVLV VNSLYEFRTL MDESLTFDMV SLRDMVLNNI SKMRPGVFVQ  360
SLVNGPYSAA FFMTRFRHAL YYFTALFDVM ENTVPRDNDQ RLLVERDIFA RSAINMIACE  420
GADRVERPQN YKEWQARNER AGLRQLPLDP DVVLILKDQV KSRYHKHFMI SEDHRWLLQG  480
WKGRVLYAHS TWASQNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-130GRAS family protein