PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG021910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 139aa MW: 15983.5 Da PI: 8.7492 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.8 | 0.00072 | 1 | 22 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ C + F++ L H+++H TRIDC4BG021910.1 1 SCTFCQRDFRSAQALGGHMNVH 22 6*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
SCTFCQRDFR SAQALGGHMN VHRRDRARLR HGDDDQARQE QADEPHQDDS TSAMYKQLEL 60 FRNPSTTTPS HLSTIIKERN NNKVVVSIAV RDQEAADHQY NDRQDLELSG RRKRRRVDQA 120 PVALASPYGQ GAFLDHSKW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 116 | RKRRR |
2 | 113 | 117 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23130.1 | 3e-14 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG021910.1 |