PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG019350.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 448aa    MW: 48594 Da    PI: 6.3001
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG019350.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS413.52e-126774412374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPil 91 
                        +lLl+cAe v+s+dl +aq++L ++ ela+p g+++qR+aayf+eA++arl +s+ +ly+ lp  +++  +    s+++aa+++f+ +sP++
  TRIDC4BG019350.4  77 LTLLLQCAESVNSDDLDEAQRALLEIAELATPFGTSTQRVAAYFAEAMSARLISSCLGLYAPLPNASSPAASrlvNSRVAAAFQVFNGISPFV 169
                       579************************************************************77666655568788899999********** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kfsh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rL++fA++lg+pfef + va 
  TRIDC4BG019350.4 170 KFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMEALEATGKRLSDFAHTLGLPFEFYP-VAG 257
                       **********************************************************....***************************.799 PP

              GRAS 185 rledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                       +  +l++e+L v++  +Ea+aV++ +  h+l+d +++ ++    +L+l+++l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a++
  TRIDC4BG019350.4 258 KAGNLDPEKLGVDTrrREAVAVHWLH--HSLYDVTGNDSN----TLNLIQRLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASY 343
                       **********999888*********9..999988888888....**********************.899*********************** PP

              GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                       +++s+er++vE++ll+rei+nv+a  g +r+ + + +++Wre+l ++GF++++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+
  TRIDC4BG019350.4 344 SEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIK-FGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLL 435
                       *****************************999987.********************************************************* PP

              GRAS 369 svSaWr 374
                       ++SaWr
  TRIDC4BG019350.4 436 TASAWR 441
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MLSAPPVPAL PPPPPPDKRR REEEQPNQPP QSPKPPPSAE ETAAAAAAAA AAASAALKER  60
KEEQRRRQRD EEGLHLLTLL LQCAESVNSD DLDEAQRALL EIAELATPFG TSTQRVAAYF  120
AEAMSARLIS SCLGLYAPLP NASSPAASRL VNSRVAAAFQ VFNGISPFVK FSHFTANQAI  180
QEAFEREDRV HIVDLDIMQG LQWPGLFHIL ASRPGGPPRV RLTGLGASME ALEATGKRLS  240
DFAHTLGLPF EFYPVAGKAG NLDPEKLGVD TRRREAVAVH WLHHSLYDVT GNDSNTLNLI  300
QRLAPKVVTM VEQDLSHSGS FLARFVEAIH YYSALFDSLD ASYSEDSSER HVVEQQLLAR  360
EIRNVLAVGG PARTGDIKFG NWREKLAQSG FRAASLAGSA AAQASLLLGM FPSDGYTLVE  420
ENGTLKLGWK DLCLLTASAW RPVQALGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein