PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG018120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 279aa    MW: 31287.9 Da    PI: 7.9633
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG018120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B394.57.1e-3037140198
                       EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.. 87 
                       f+k+ltpsdv+k++rlv+pk++ae++    g + e++  l++ de g+ W+++++y+ +s++yvltkGW+++vk+++L++gD+v F++++   
  TRIDC4BG018120.2  37 FEKALTPSDVGKLNRLVIPKQHAERCfplaGDSGEKGLLLSFDDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKHLEAGDVVHFERVRGlg 129
                       99****************************666668889************************************************886554 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                       ++ +l+++ +r
  TRIDC4BG018120.2 130 TGDRLFIGCRR 140
                       55556666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MAMNPLSQEH PNAWPWGVAM YTNLHYQQYH YEKEHLFEKA LTPSDVGKLN RLVIPKQHAE  60
RCFPLAGDSG EKGLLLSFDD EAGKPWRFRY SYWTSSQSYV LTKGWSRYVK EKHLEAGDVV  120
HFERVRGLGT GDRLFIGCRR RGDVSAPTAV APPPAVRVVP ASGQSPREQL QYQQPWSPMC  180
YSTSSSYPTS PATSHAYRRS AEHDHRDMHH AGESQWDADT RSCSPASAPT RRLRLFGVNL  240
DCGPEPEAEA VPATPAMYGY VHQSPYAAVS PVPNNWGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.21e-52B3 family protein