PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG017760.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 868aa MW: 94236 Da PI: 6.1345

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG017760.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00067	673	710	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq TRIDC4BG017760.10 673 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 710 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence
MAVGDALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG 60 CSAAVDSICS LVRKDMAEQV HVVGEGTVGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY 120 QFRAGIKTIA IIPVLPRGVL QLGSTGVVME NTSFVMHAKK LCSQLNQRSS MASSASVKNN 180 SFSQFPVIRE QYRRSDSATA SSSKSLNASL FEAAQQNGLT GREHIVYGKP NDMFVQQASY 240 CDNRLGSNTQ SAEISSGLVP SSLASVEQQQ MLMNTIGQLE FGSGTDLARS ALLKSLLYRN 300 PFMHETSDMK LSHGRVGLPQ GTAGHGSYGF LPGSAGVVST TLCTSSQVSE QGSHSSSGML 360 RQKQPPVSCN VPQSSEFTMK MVHQERRSSE GALPVSSQSD VQVSNCLNGM SQENLLSRSG 420 HMQKDQNADR ANDPRVAVST QGVKNMDGCM LPAMPSETTH SLLLQPTWDN DLFDIFGSEF 480 HQLGHNVDAN LVSSCDAKSH SLDREATEPS ICLDSSSLFS SLDNDFPCSG IFSLTDTDQL 540 LDAVISNVNP SSKQSSDDNA SCKTALTDIP NISHFGLEEL KQCDSSGIPS TVIKNESTQI 600 VKQPYYFDKT EDGCLSQNNG AQKSQIRLWI ENGQNMKCES ASASNSKGLD TQSKSNRKRS 660 RPGESSKARP KDRQLIQDRI KELREMVPNG AKCSIDALLE KTVKHMLFLQ SVTKHADKLK 720 DSTESKILGS ENGPVWKDYF EGGATWAFDV GSQSMTCPII VEDLDRPRQM LVEMICEDRG 780 IFLEIADFIK GLGLTILRGV MEARKSKIWA RFTVEANRDV TRMEIFLSLV RLLEPNCDGS 840 GAAENPNSVN MPLGLVRQPV IPATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence

MAVGDALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG  60
CSAAVDSICS LVRKDMAEQV HVVGEGTVGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY  120
QFRAGIKTIA IIPVLPRGVL QLGSTGVVME NTSFVMHAKK LCSQLNQRSS MASSASVKNN  180
SFSQFPVIRE QYRRSDSATA SSSKSLNASL FEAAQQNGLT GREHIVYGKP NDMFVQQASY  240
CDNRLGSNTQ SAEISSGLVP SSLASVEQQQ MLMNTIGQLE FGSGTDLARS ALLKSLLYRN  300
PFMHETSDMK LSHGRVGLPQ GTAGHGSYGF LPGSAGVVST TLCTSSQVSE QGSHSSSGML  360
RQKQPPVSCN VPQSSEFTMK MVHQERRSSE GALPVSSQSD VQVSNCLNGM SQENLLSRSG  420
HMQKDQNADR ANDPRVAVST QGVKNMDGCM LPAMPSETTH SLLLQPTWDN DLFDIFGSEF  480
HQLGHNVDAN LVSSCDAKSH SLDREATEPS ICLDSSSLFS SLDNDFPCSG IFSLTDTDQL  540
LDAVISNVNP SSKQSSDDNA SCKTALTDIP NISHFGLEEL KQCDSSGIPS TVIKNESTQI  600
VKQPYYFDKT EDGCLSQNNG AQKSQIRLWI ENGQNMKCES ASASNSKGLD TQSKSNRKRS  660
RPGESSKARP KDRQLIQDRI KELREMVPNG AKCSIDALLE KTVKHMLFLQ SVTKHADKLK  720
DSTESKILGS ENGPVWKDYF EGGATWAFDV GSQSMTCPII VEDLDRPRQM LVEMICEDRG  780
IFLEIADFIK GLGLTILRGV MEARKSKIWA RFTVEANRDV TRMEIFLSLV RLLEPNCDGS  840
GAAENPNSVN MPLGLVRQPV IPATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-52	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG017760.10