PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG013090.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 741aa MW: 80669.8 Da PI: 6.8858 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51.6 | 1.6e-16 | 116 | 170 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rkR ++ + q++eLe++F+++++p+++ r L+kk+ ++ +Vk+WFqNrR +k TRIDC4BG013090.2 116 RKRGRHANRQIQELEAMFQQCPHPDENLRIALSKKVCMDPLRVKFWFQNRRNAKK 170 79999**********************************************8777 PP | |||||||
2 | START | 90.7 | 3e-29 | 305 | 525 | 5 | 205 |
HHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT CS START 5 eaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg 88 +a++el+ +++ +ep+W + e ++ + ++ + ++ ++ r++g+ ++ a+lv++++d + +W+et++ ++++ +s + TRIDC4BG013090.2 305 AALRELMMLMKQGEPMWQPAAlggEVLDHQLYRATTLPGLLelpppgFTANGTRDTGLIMCTGADLVRIFMDEN-CWSETFP--DIVASVSAD 394 78899999999999999999999988888888888888666889888899999*********************.*******..888888888 PP .........EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.....-TTSEE-EESSEEEEEEEECTCEEEEEEE CS START 89 .........galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe....sssvvRaellpSgiliepksnghskvtwv 167 g + lm+a l +lsp v+ d+ fvR+++ ++g+w++vdvS+d + + + +++lpSg+li+++ ng++kv ++ TRIDC4BG013090.2 395 nighgcicqGGVILMKAGLRVLSPGVSsCDVKFVRQCQMIEQGVWAVVDVSLDANGTSELrawnTGLPGACRVLPSGCLIKDMNNGYCKVAMI 487 8889899999999***********9999*************************9999988887544446679********************* PP E-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 168 ehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205 ++++++ + l++l++sg+ + a++w+ lqr ce TRIDC4BG013090.2 488 VNAEYDKGFMRPPLHPLLSSGHTFSARRWLTSLQRRCE 525 ***********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 741 aa Download sequence |
MVASLPSLLC WKHCLGVKSG VGSICLVVVW WIWSGQRLGE HGALVVSPFG VDHRSTVAMV 60 GEWQPQNGQV HDEIDLSIPV DDKDLIWSNT GTMDDDEDVA TADEGITDAG SASHMRKRGR 120 HANRQIQELE AMFQQCPHPD ENLRIALSKK VCMDPLRVKF WFQNRRNAKK NQNERQQNMV 180 LRTENIMLEE ENRAMKAAIL KKTCPTCKGP MVFFRPLTPE LRRLHMENAR LKAELLHRTA 240 YLHGVSAGTA GSSRILCDLN VDPVMPLPLR QDDLMADTMG HCAPGGCASA AGGPEHAALE 300 RHVLAALREL MMLMKQGEPM WQPAALGGEV LDHQLYRATT LPGLLELPPP GFTANGTRDT 360 GLIMCTGADL VRIFMDENCW SETFPDIVAS VSADNIGHGC ICQGGVILMK AGLRVLSPGV 420 SSCDVKFVRQ CQMIEQGVWA VVDVSLDANG TSELRAWNTG LPGACRVLPS GCLIKDMNNG 480 YCKVAMIVNA EYDKGFMRPP LHPLLSSGHT FSARRWLTSL QRRCEFLAQR LSPAYGISRA 540 GGAITPEGRN NVLELARRMT ESFYVAISAP RGEAWRKVAD SRGSCGVGGE SFQLAMHVVT 600 PLAAPGEQAA GLVLCATTTA WLPEIPPQRV FDYICDVERR GEWDVLAEGA RVQEDASLAT 660 AQFPLTGVSI LRPTGRGRGG SSCNKKLILQ QACGDAPCMV VAYAPIDTAD LKDVMHGGRR 720 ASLSLLPSGF SILPDGVGDI Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 1e-110 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG013090.2 |