PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG010670.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 339aa MW: 37096 Da PI: 10.4402 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.2 | 1.2e-31 | 273 | 330 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ TRIDC4BG010670.4 273 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPSMLIVTYEGEHNHT 330 9*************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MEEVEEANRM AVASCHRVLG LLTQTQDPAQ LRSIALGTDE ACAKFRKVVS LLGNGNEGGG 60 THPRAKLVSR RQTPGFLSQK SFLDNNTPVV VLNSAHPSTS SAQVYPRNSI LDSQPAHPIG 120 GLPKLVQPLS AHFQFGDSSR YNQFQQHQHQ QQKMRAEMFK RSNSGINLKF DSPSGTGTMS 180 SARSFMSSLS MDGSVASLDA KSSSFHLIGG PAMSDPVNAQ QAPRRRCSGR GEDGNGKCAA 240 TGRCHCSKRR KLRVKRTIKV PAISNKIADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSV 300 RGCPARKHVE RCVDDPSMLI VTYEGEHNHT RMPTQSAQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04670.1 | 8e-84 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG010670.4 |