PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG008980.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 363aa MW: 40184.2 Da PI: 6.7237

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG008980.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.4e-09	287	325	17	55
HHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 17 elFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 e+ +k +yps++++ LA+++gL+ +q+ +WF N+R ++ TRIDC4BG008980.2 287 EMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRH 325 5566789*****************************885 PP
2	ELK	37.1	6.7e-13	245	266	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+Ll+KYsgyL+sLkqE+s TRIDC4BG008980.2 245 ELKHHLLKKYSGYLSSLKQELS 266 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MEEIGHHFGL GATAHGQHHS QLPWGSSPLS AVIAPPPQQQ QQQQQSAGYL AHSPLSLNTA 60 PPSGSHGGGS GCSNPVLQLA NGSLLEACAK AAKEPSSSSY AADVEAIKAK IISHPHYSSL 120 LAAYLDCQKV GAPPEVLARL TAVAQDLELR QRTALGSLGT ATEPELDQFM EAYHEMLVKY 180 REELTRPLQE AMEFLRRVET QLNSLSISGR SLRNILSSGS SEEDQEGSGG ETELPEIDAH 240 GVDQELKHHL LKKYSGYLSS LKQELSKKKK KGKLPKDARQ QLLSWWEMHY KWPYPSESQK 300 VALAESTGLD LKQINNWFIN QRKRHWKPSD EMQFVMMDAY QPPNAAFYMD GHFVNDSGLY 360 RFG

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MEEIGHHFGL GATAHGQHHS QLPWGSSPLS AVIAPPPQQQ QQQQQSAGYL AHSPLSLNTA  60
PPSGSHGGGS GCSNPVLQLA NGSLLEACAK AAKEPSSSSY AADVEAIKAK IISHPHYSSL  120
LAAYLDCQKV GAPPEVLARL TAVAQDLELR QRTALGSLGT ATEPELDQFM EAYHEMLVKY  180
REELTRPLQE AMEFLRRVET QLNSLSISGR SLRNILSSGS SEEDQEGSGG ETELPEIDAH  240
GVDQELKHHL LKKYSGYLSS LKQELSKKKK KGKLPKDARQ QLLSWWEMHY KWPYPSESQK  300
VALAESTGLD LKQINNWFIN QRKRHWKPSD EMQFVMMDAY QPPNAAFYMD GHFVNDSGLY  360
RFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	8e-98	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG008980.2