PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG008820.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 343aa MW: 37162.9 Da PI: 5.6921

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG008820.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.4	2.1e-12	166	213	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L +++P + kK++Ka++L A++Y+k Lq TRIDC4BG008820.2 166 QDHIMAERKRREKLSERFIALSKIVPGL-----KKMDKASVLGDAIKYVKTLQ 213 6799**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MATQWFSNMV MDEPSFFHQW QSDATLEQYT EQQIAVAFGQ GEMEAAALMQ QQHQYAAAAA 60 GEHRPRKAAK VNTSWDSCVT EQGSPADSSS PTILSFGGHA DAFAKAPQAP SAAAAYYGAA 120 SAAAPVKPKQ EVDAGAVASF QQVKRSYDAM VAEPARAPSR PAAQNQDHIM AERKRREKLS 180 ERFIALSKIV PGLKKMDKAS VLGDAIKYVK TLQEQVKGME EVARRRPVES AVLVKKSQLA 240 ADEDDGSSCD ENFEGADAGL PEIEARMSDR TVLVKIHCEN RRGVLVAALS ELESIDLAIM 300 NTNVLPFTTS SIDITIMATA GEDFSLSVKD IVRKLHQAFK SSP

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MATQWFSNMV MDEPSFFHQW QSDATLEQYT EQQIAVAFGQ GEMEAAALMQ QQHQYAAAAA  60
GEHRPRKAAK VNTSWDSCVT EQGSPADSSS PTILSFGGHA DAFAKAPQAP SAAAAYYGAA  120
SAAAPVKPKQ EVDAGAVASF QQVKRSYDAM VAEPARAPSR PAAQNQDHIM AERKRREKLS  180
ERFIALSKIV PGLKKMDKAS VLGDAIKYVK TLQEQVKGME EVARRRPVES AVLVKKSQLA  240
ADEDDGSSCD ENFEGADAGL PEIEARMSDR TVLVKIHCEN RRGVLVAALS ELESIDLAIM  300
NTNVLPFTTS SIDITIMATA GEDFSLSVKD IVRKLHQAFK SSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	177	ERKRRE
2	173	178	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-55	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG008820.2